New R-Package: AGHmatrix
What this package can do!
This is a new R-Package that you can use to create the numerator relationship matrix (A) for diploid and autopolyploid species, out of the pedigree and molecular markers. See the table below to see what matrices construction have been implemented so far in the package.
How to Cite: Amadeu et al 2016 (See full citation under Publications)
Plot Genealogy App
What this app can do?
A handy application to plot genealogy for a given cultivar/genotype, you just need to upload a csv with the pedigree in three column format.
Diploid and Tetraploid data used for GWAS analysis in blueberry
When using this data, please cite the original publication:
Ferrão LFV, Benevenuto J, de Bem Oliveira I, Cellon C, Olmstead J, Kirst M, Resende Jr. MFR, Munoz P (2018) Insights into the genetic basis of blueberry fruit-related traits using diploid and polyploid models in a GWAS context. Frontiers in Ecology and Evolution 6: 107. https://doi.org/10.3389/fevo.2018.00107